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1) Message boards : Projects : SiDOCK@Home
Message 114243 Posted 11 Jul 2024 by Sir LanDroid |
The next target for anlysis is Ebolavirus glycoprotein (GP). ...We hope that our computations will contribute to the fight against Ebola! https://www.sidock.si/sidock/forum_thread.php?id=285#2284 |
2) Message boards : Projects : TN-Grid
Message 113711 Posted 2 Mar 2024 by Sir LanDroid |
New experiment on Spinal muscular atrophy (SMA) from Mus musculus We just started two experiments (gene expansion) on two different datasets (rnaseq, riboseq). There will be a total of about 140k workunits (2x tasks), each one relatively fast, distributed in batches. 2/13/24 If interested please follow the discussion here: https://gene.disi.unitn.it/test/forum_thread.php?id=384 However current WU status = 0 to send... |
3) Message boards : Projects : SiDOCK@Home
Message 113462 Posted 27 Jan 2024 by Sir LanDroid |
Dear all, we have obtained results for different targets of SARS-CoV-2. The computations continue, and we want to ask your opinion on the next target. You can vote for one of them until February 5th, 2024. * SARS-CoV-2 main protease (3CLpro) further studies This is a crucial therapeutic target against SARS-CoV-2. 3CLpro (cysteine protease; EC 3.4.22.69) in particular is crucial for the cleavage of coronavirus polyproteins to form mature non-structural proteins that are themselves essential for viral replication mechanisms. We still need much more research on this target towards new more potent inhibitors. * Ebolavirus glycoprotein (GP) Ebola virus is a dangerous pathogen to humans and this target could be a perfect study case for PPI-type drug design scenario. The EBOV glycoprotein (GP) is the only virally expressed protein on the virion surface and is critical for attachment to host cells and catalysis of membrane fusion. * Swine acute diarrhea syndrome coronavirus (SADS-CoV PLpro) This target would enable us to study the design on multiple related viral targets. Swine acute diarrhea syndrome coronavirus (SADS-CoV), a newly emerging enteric coronavirus, is considered to be associated with swine acute diarrhea syndrome (SADS) which has caused significantly economic losses to the porcine industry. The pathogen indicates towards host-jump potential. Original thread with link to vote: https://www.sidock.si/sidock/forum_thread.php?id=268 |
4) Message boards : Projects : Known potential evil applications of some BOINC projects?
Message 113222 Posted 4 Dec 2023 by Sir LanDroid |
- Many years ago there was a password cracking project possibly up to no good. It was shut down probably because it relied on Rainbow Tables, which someone thought made the project gay. - I'm not too sure about Prime Grid. It probably helps the NSA to some extent. - The leaders of the SiDock project are from Russia and Slovenia so it's gotta be sketchy. <= Disclaimer / Joke: I don't believe this & crunch it. - Einstein@Home calculates data for the next generation of nuke weaponry. |
5) Message boards : Projects : DENIS Medical research
Message 112198 Posted 29 Jun 2023 by Sir LanDroid |
Dear volunteers, Hmmmmm.....This might not turn out well.... |
6) Message boards : Projects : Einstein@Home
Message 111637 Posted 22 Apr 2023 by Sir LanDroid |
Results from deep all-sky search on LIGO O3 data Additional details at two links above. "...there are no neutron stars rotating faster than 12,000 rpm with equatorial mountains larger than half a millimeter..." Wow the level of precision is astonishing. |
7) Message boards : Projects : DENIS Medical research
Message 111540 Posted 11 Apr 2023 by Sir LanDroid |
Dear volunteers, Click the link for more details including a graph of the error rate. They are now allowing the simulations to run with fewer constraints. Early results seem promising for improving this model of the electrical activity of cardiac cells. WUs seem to come in batches as they simulate, tweak the model, simulate...etc... |
8) Message boards : Projects : Anything and Everything to do with (WCG) World Community Grid
Message 111490 Posted 3 Apr 2023 by Sir LanDroid |
I just reported 30 WUs and received 1 new Covid task. ππβ¨π As reported earlier, Smashing Childhood Cancer tasks should also be available. |
9) Message boards : Projects : Einstein@Home
Message 111481 Posted 2 Apr 2023 by Sir LanDroid |
News about Einstein@Home searches for radio and gamma-ray pulsars Check the link for more updates on the following topics. All Arecibo data analyzed Green Bank Telescope MeerKAT Post-processing of Arecibo data coming to Zooniverse Finding gamma-ray pulsars in Fermi LAT data |
10) Message boards : Projects : Anything and Everything to do with (WCG) World Community Grid
Message 111480 Posted 2 Apr 2023 by Sir LanDroid |
We evaluated the possibility of starting download of processed WUs, while not sending new WUs out. It was determined that the risk of complications that might result from doing this with incomplete information available to our scheduler and BOINC or any other unforeseen issues is too high. I was thinking it might help the overall situation if we set WCG to "No New Tasks." That way once the finished WUs start reporting, that traffic would not compete with new tasks downloading. Perhaps wait a few days after reporting to start downloading new WUs. But after reading the above quote, it appears either that won't help much or WCG doesn't have information on that situation. However the pipeline is likely to be completely overloaded for while - seems like reducing total traffic for a brief period (by delaying DL of new tasks) would help the entire system recover more quickly? Waddya think? |
11) Message boards : Projects : Anything and Everything to do with (WCG) World Community Grid
Message 111431 Posted 27 Mar 2023 by Sir LanDroid |
...it will take about 74 hours. Sounds good, but don't assume that is around the clock crunching. Spread over 8 hour days and no weekends or a standard 40 hour week, that could be 2 more weeks. So maybe 4/10? |
12) Message boards : Projects : Anything and Everything to do with (WCG) World Community Grid
Message 111423 Posted 27 Mar 2023 by Sir LanDroid |
C'mon folks we are slipping - there were zero complaints about WCG being down yesterday. This is unacceptable especially since they don't even work on weekends - we must do better. Here's the first complaint today, can someone sign up for this afternoon? Ni! π |
13) Message boards : Projects : Anything and Everything to do with (WCG) World Community Grid
Message 111411 Posted 24 Mar 2023 by Sir LanDroid |
on a quick update, finally, /science filesystem is on the move to the new storage from the recovery storage unit. As of last night, after 3 hours, the new storage /science filesystem shows 1.4TB used. Assuming such average rate of file transfer, it will take about 74 hours. Hopefully, we will be able to restart BOINC from the new storage and finally put the failure behind us. We will keep you posted. That's an update a few hours ago from someone who appears to be on Krembil / Jurisica team. Here's another post looking ahead - doesn't make much sense and does not sound good... as for the help - logistic is tricky considering we run from a different data centre - and of course we cannot give access to a broad group - but once we can at lest walk again, there are things we plan on our side, and other with the broader community. Briefly - we need to simplify the backend - at the moment, we often run into multi points of failure, instead of robustness. But - once we will be in such a position - we want to run hackathons - this can substantially help with optimizing code we run on the grid, and bring new projects. So far, nVidia is interested to discuss this further - as our plan is to bring more GPU projects. But - of course the backend has to be upgraded before that - as peak performance during GPU stress test in 2021 was around 16PFLOPS. |
14) Message boards : Projects : Anything and Everything to do with (WCG) World Community Grid
Message 111393 Posted 23 Mar 2023 by Sir LanDroid |
Smashing Childhood Cancer has WUs teed up, waiting on the restart. https://www.worldcommunitygrid.org/about_us/article.s?articleId=783 |
15) Message boards : Projects : World Community Grid has announced an extended outage from Feb 14 to April 22, 2022
Message 111223 Posted 8 Mar 2023 by Sir LanDroid |
Another round of cascading hardware failures since about 3/1, replacing one thing and finding another problem. Here's the latest update from WCG - they're posting to Facebook & Twitter since their web site is down.Hello everyone, hope you had a great weekend. We are still working with data centre to resolve the hardware failure so we can restart the storage, BOINC and website ASAP. We will post updates as we receive them. Thank you for your patience. |
16) Message boards : Projects : DENIS Medical research
Message 111221 Posted 8 Mar 2023 by Sir LanDroid |
Dear volunteers, Allow me a brief message to update you on how the results are going after 15 more days of simulation. 5 iterations of the algorithm have already been completed. Of the 100 markers that we are using, 89 have already been achieved in the normal range (initially only 77 were). On the other hand, the distance between the average experimental behavior and the model has been reduced by 56.84%. Several parameters of the algorithm indicate that there is still room for improvement. We will keep you informed. All the best, JesΓΊs Carro https://twitter.com/InSilicoHeart Universidad San Jorge https://www.usj.es/ March 8, 2023 Link to this update: https://denis.usj.es/denisathome/forum_thread.php?id=254 |
17) Message boards : Projects : SiDock@home
Message 111113 Posted 24 Feb 2023 by Sir LanDroid |
They have been issuing a steady diet of very large WUs, taking several days to process on my old system. I7-3770 4 core/8 threads with 12G DDR3 ram. Check how your system digests these large meals... Ni! |
18) Message boards : Projects : World Community Grid has announced an extended outage from Feb 14 to April 22, 2022
Message 110420 Posted 11 Nov 2022 by Sir LanDroid |
Here's an update thread started Nov. 10. Some folks are seeing significant improvements. https://www.worldcommunitygrid.org/forums/wcg/viewthread_thread,44700_offset,0 |
19) Message boards : Projects : World Community Grid has announced an extended outage from Feb 14 to April 22, 2022
Message 109709 Posted 27 Aug 2022 by Sir LanDroid |
Excerpts from an update posted early this morning.We have taken additional measures to increase the quantity of WUs we can send out, and we have been able to increase the quantity of WUs in flight at any given time. Volunteers should see this reflected on their devices now, and perhaps even over this past week. [/quote] |
20) Message boards : Projects : Project DENIS has restarted
Message 109658 Posted 18 Aug 2022 by Sir LanDroid |
Status of the project Hello! I am writing this post to summarize a little news that we have had over the last month. As we have already commented on the forums, we detected a problem with the checkpoint files that caused many windows tasks to end with an invalid result. After several tests and several attempts we have managed to detect where the problem was and solve it. Due to this, we have implemented some of the improvements that we had planned for the checkpoint file. We have made it more robust. We have kept it as beta for quite a few days and it seems that the problem is fixed. We will continue to analyze how the program works, but the percentage of errors that we receive is more than reasonable in a project of these characteristics. A special thanks to all of you who have been giving us feedback and helping us find the problem. Today we have re-launched simulations in the NHuVe project. These tasks are no longer beta. We will inform you of the status of that project as we receive results. In the coming weeks we also plan to add tasks to the HuVeMOp project. With both projects working we hope to have a fairly stable flow of tasks. On the other hand, we have been working on expanding the number of platforms and we have added in beta mode an application for ARM64 on linux (e.g. RaspberryPi), and ARM for Apple (for new Apple chips). We want to see how well they work. If all goes well, in the short term we could also consider expanding to Android. All the best, Jesus. 8/17/22 https://denis.usj.es/denisathome/ |
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